************************************************
* START TREE SEARCH USING MPI WITH 1 PROCESSES *
************************************************
Random seed of master = 217780
IQ-TREE MPI multicore version 1.5.5 for Linux 64-bit built May 30 2018
Copyright (c) 2011-2017 by Bui Quang Minh, Nguyen Lam Tung,
Olga Chernomor, Heiko Schmidt, and Arndt von Haeseler.

Host:    holy7c26405.rc.fas.harvard.edu (AVX512, FMA3, 503 GB RAM)
Command: /n/helmod/apps/centos7/MPI/gcc/7.1.0-fasrc01/openmpi/2.1.0-fasrc02/iqtree/1.5.5-fasrc02/bin/iqtree-omp-mpi -nt 64 -st AA -ninit 10 -bb 1500 -pre 57taxa -msub nuclear -s ../../matrices/Concatenated_57taxa/57taxa_concatenated.phy -m MFP -mset LG,WAG -rcluster 10 -madd LG4M,LG4X,LG+C10 -mrate G,R,E -mwopt
Seed:    217780 (Using SPRNG - Scalable Parallel Random Number Generator)
Time:    Fri Dec  3 01:28:54 2021
Kernel:  AVX+FMA - 64 threads (64 CPU cores detected)

Reading alignment file ../../matrices/Concatenated_57taxa/57taxa_concatenated.phy ... Phylip format detected
Alignment most likely contains protein sequences
WARNING: 80554 sites contain only gaps or ambiguous characters.
Alignment has 114 sequences with 665354 columns and 462801 patterns (287349 informative sites, 290696 constant sites)
                                                              Gap/Ambiguity  Composition  p-value
   1  Californiulus_sp                                               56.84%    failed      0.00%
   2  Uroblaniulus_sp                                                55.49%    failed      0.00%
   3  Anadenobolus_sp                                                53.47%    failed      0.00%
   4  Pseudocellus_sp_iz140060                                       93.67%    failed      0.00%
   5  Orinisobates_nigrior                                           57.58%    failed      0.00%
   6  Notiphilides_grandis                                           64.07%    failed      0.00%
   7  Callipus_foetidissimus_SRR3485975                              76.54%    failed      0.00%
   8  Strigamia_maritima_2                                           64.10%    failed      0.00%
   9  Ommatoiulus_sabulosus_SRR1653222                               64.56%    failed      0.00%
  10  Strigamia_maritima_1                                           57.72%    failed      0.00%
  11  Hanseniella                                                    60.67%    failed      0.00%
  12  Glomeridella_minima_SRR3485983                                 57.59%    failed      0.00%
  13  Alipes_grandidieri                                             59.76%    failed      0.00%
  14  Symphyla_japan                                                 74.40%    failed      0.00%
  15  Craterostigmus_tasmanianus_SRR2774008                          56.88%    failed      0.00%
  16  Theatops_spinicaudus                                           67.63%    failed      0.00%
  17  Clinopodes_flavidus_SRR1653181                                 53.78%    failed      0.00%
  18  Himantarium_gabrielis_SRR1653198                               53.76%    failed      0.00%
  19  Paralamyctes_validus                                           72.44%    failed      0.00%
  20  Anoplodactylus_insignis_IZ_134527_isoSingle                    69.62%    failed      0.00%
  21  Scolopendropsis_bahiensis                                      62.57%    failed      0.00%
  22  Rhinotus_purpureus                                             58.28%    failed      0.00%
  23  Mecistocephalus_guildingii                                     59.00%    failed      0.00%
  24  Craspedosoma_sp_AD2016_SRR3485977                              49.49%    failed      0.00%
  25  Schendyla_carniolensis_SRR3485996                              55.93%    failed      0.00%
  26  Siphonoconus                                                   64.64%    failed      0.00%
  27  Striaria_sp_MITS013                                            51.69%    failed      0.00%
  28  Cyrtodesmus_sp                                                 63.04%    failed      0.00%
  29  Desmonus_earlei_MITS016                                        55.54%    failed      0.00%
  30  Cryptops_anomalans_SRR3485978                                  55.36%    failed      0.00%
  31  Strigamia_acuminata_SRR3485997                                 55.15%    failed      0.00%
  32  Cryptops_hortensis                                             55.43%    failed      0.00%
  33  Hanseniella_nivea_SRR3485984                                   52.16%    failed      0.00%
  34  Cleidogona_sp                                                  64.33%    failed      0.00%
  35  Abacion_magnum                                                 74.93%    failed      0.00%
  36  Symphylella_sp_AD2014_SRR1653241                               56.34%    failed      0.00%
  37  Pauropus_huxleyi                                               68.33%    failed      0.00%
  38  Scutigera_coleoptrata_SRR1653237                               52.74%    failed      0.00%
  39  Glomeris_marginata                                             70.41%    failed      0.00%
  40  Henia_brevis                                                   59.68%    failed      0.00%
  41  Scolopendra_cingulata_SRR1653235                               53.99%    failed      0.00%
  42  Orthoporus_sp_2                                                73.20%    failed      0.00%
  43  Polyxenus_lagurus_SRR3485994                                   60.24%    failed      0.00%
  44  Eudigraphis_takakuwai_SRR1653191                               60.40%    failed      0.00%
  45  Anopsobius_giribeti                                            58.29%    failed      0.00%
  46  Onomeris_sp                                                    60.24%    failed      0.00%
  47  Henia_illyrica_SRR3485986                                      54.74%    failed      0.00%
  48  Glomeridesmus_sp_2                                             52.86%    failed      0.00%
  49  Polydesmus_angustus                                            88.54%    failed      0.00%
  50  Polyzonium_germanicum_SRR3485995                               56.83%    failed      0.00%
  51  Eudigraphis_taiwanensis                                        61.80%    failed      0.00%
  52  Scoterpes_sp_AUMS15047                                         53.61%    failed      0.00%
  53  Scolopocryptops_rubiginosus_SRR1653236                         53.80%    failed      0.00%
  54  Newportia_adisi                                                63.45%    failed      0.00%
  55  Cambala_annulata                                               69.07%    failed      0.00%
  56  Centruroides_sculpturatus_IZ_46910_isoSingle                   60.86%    failed      0.00%
  57  Haploglomeris_multistriata_SRR3485985                          58.37%    failed      0.00%
  58  Andrognathus_corticarius                                       57.35%    failed      0.00%
  59  Narceus_americanus                                             73.79%    failed      0.00%
  60  Stenotaenia_linearis                                           61.37%    failed      0.00%
  61  Brachycybe_lecontii                                            54.81%    failed      0.00%
  62  Scolopendra_subspinipes_SRR6377863                             50.96%    failed      0.00%
  63  Polydesmus_complanatus_SRR3485993                              53.30%    failed      0.00%
  64  Tygarrup_javanicus                                             63.33%    failed      0.00%
  65  Thrinaxoria_sp_M1                                              61.11%    failed      0.00%
  66  Lithobius_sp                                                   58.58%    failed      0.00%
  67  Folsomia_isoSingle                                             67.30%    failed      0.00%
  68  Neogovea_matawai_MCZ133922                                     82.88%    failed      0.00%
  69  Polyxenidae_sp_2438_JEB_0005                                   71.04%    failed      0.00%
  70  Hydroschendyla_submarina                                       66.40%    failed      0.00%
  71  Abacion_sp_MITS007                                             59.60%    failed      0.00%
  72  Artemia_salina_MCZ_IZ_141349_Crust208_TransD_Iso_Single        72.54%    failed      0.00%
  73  Scolopocryptops_sexspinosus                                    69.29%    failed      0.00%
  74  Asiomorpha_coarctata                                           76.29%    failed      0.00%
  75  Pseudopolydesmus_sp                                            69.39%    failed      0.00%
  76  Sigmoria_latior_munda                                          75.23%    failed      0.00%
  77  Eupolybothrus_cavernicolus_ERR338470                           51.59%    failed      0.00%
  78  Scutigerina_weberi                                             65.80%    failed      0.00%
  79  Craterostigmus_crabilli                                        76.03%    failed      0.00%
  80  Cylindroiulus_punctatus                                        64.01%    failed      0.00%
  81  Acopauropus_ornatus_SRR3485973                                 59.29%    failed      0.00%
  82  Platydesmus_sp                                                 55.17%    failed      0.00%
  83  Scutigera_coleoptrata                                          73.89%    failed      0.00%
  84  Hanseniella_sp_AD2014_SRR1653195                               63.08%    failed      0.00%
  85  Calanus_finmarchicus_MCZ_IZ_60621_Crust123_TransD_Iso_Single   74.33%    failed      0.00%
  86  Xystodesmidae_sp_AUMS5334                                      64.28%    failed      0.00%
  87  Akymnopellis_chilensis                                         85.32%    failed      0.00%
  88  Glomeridesmus_sp_1                                             63.03%    failed      0.00%
  89  Sphendononema_guildingii                                       78.66%    failed      0.00%
  90  Limulus_polyphemus_isoSingle                                   68.18%    failed      0.00%
  91  Prostemmiulus_loomisi                                          79.68%    failed      0.00%
  92  Tylobolus                                                      68.57%    failed      0.00%
  93  Eupolybothrus_tridentinus_SRR3485982                           60.70%    failed      0.00%
  94  Orthoporus_sp_1                                                78.35%    failed      0.00%
  95  Sphaerotheriidae_sp                                            88.86%    failed      0.00%
  96  Petaserpes_sp                                                  80.80%    failed      0.00%
  97  Craterostigmus_tasmanianus                                     70.72%    failed      0.00%
  98  Floridobolus_sp                                                79.32%    failed      0.00%
  99  Rhysida_longipes                                               69.97%    failed      0.00%
 100  Idotea_baltica_MCZ_IZ_71215                                    79.11%    failed      0.00%
 101  Eupolybothrus_fasciatus_SRR3485981                             74.05%    failed      0.00%
 102  Lithobius_atkinsoni                                            85.90%    failed      0.00%
 103  Himantarium_gabrielis                                          79.37%    failed      0.00%
 104  Microspirobolus_sp                                             90.11%    failed      0.00%
 105  Cyliosoma                                                      96.89%    failed      0.00%
 106  Mimops_orientalis_2_WG05102                                    87.62%    failed      0.00%
 107  Scutigerella                                                   91.53%    failed      0.00%
 108  Chondromorpha_cairoensis                                       97.70%    failed      0.00%
 109  Prostemmiulus_sp                                               90.12%    failed      0.00%
 110  Siphonophorus_sp_1                                             98.70%    failed      0.00%
 111  Xibalbanus_tulumensis                                          98.50%    failed      0.00%
 112  Mimops_orientalis_2_WG05101                                    96.39%    failed      0.00%
 113  Thalassisobates_littoralis_SRR1653242                          95.43%    failed      0.00%
 114  Trichomorpha_sp                                                97.22%    failed      0.00%
WARNING: 113 sequences contain more than 50% gaps/ambiguity
****  TOTAL                                                          67.71%  114 sequences failed composition chi2 test (p-value<5%; df=19)
NOTE: minimal branch length is reduced to 0.000000150296 for long alignment

Create initial parsimony tree by phylogenetic likelihood library (PLL)... 34.037 seconds

NOTE: ModelFinder requires 84162 MB RAM!
ModelFinder will test 47 protein models (sample size: 665354) ...
 No. Model         -LnL         df  AIC          AICc         BIC
  1  LG+G4         15605801.688 226 31212055.377 31212055.531 31214633.602
  2  LG+R2         15804806.757 227 31610067.514 31610067.670 31612657.147
  3  LG+R3         15616907.023 229 31234272.046 31234272.204 31236884.495
  4  LG+R4         15577604.516 231 31155671.032 31155671.193 31158306.297
  5  LG+R5         15568705.915 233 31137877.830 31137877.994 31140535.911
  6  LG+R6         15566959.410 235 31134388.820 31134388.987 31137069.718
  7  LG+R7         15566558.792 237 31133591.583 31133591.753 31136295.297
  8  LG+R8         15566530.520 239 31133539.040 31133539.212 31136265.570
  9  LG+R9         15566517.798 241 31133517.596 31133517.771 31136266.942
 10  LG+R10        Skipped 
 11  LG            17152928.814 225 34306307.629 34306307.781 34308874.445
 12  LG+F+G4       14311280.516 245 28623051.031 28623051.212 28625846.009
 13  LG+F+R2       14530460.344 246 29061412.688 29061412.871 29064219.074
 14  LG+F+R3       14333671.875 248 28667839.749 28667839.935 28670668.952
 15  LG+F+R4       14288038.538 250 28576577.076 28576577.264 28579429.094
 16  LG+F+R5       14275890.367 252 28552284.734 28552284.926 28555159.569
 17  LG+F+R6       14272621.585 254 28545751.169 28545751.364 28548648.820
 18  LG+F+R7       14271748.200 256 28544008.400 28544008.598 28546928.867
 19  LG+F+R8       14271560.902 258 28543637.804 28543638.005 28546581.087
 20  LG+F+R9       14271525.417 260 28543570.833 28543571.037 28546536.933
 21  LG+F+R10      14271507.146 262 28543538.292 28543538.499 28546527.207
 22  LG+F          15817069.449 244 31634626.899 31634627.078 31637410.469
 23  WAG+G4        15550828.132 226 31102108.263 31102108.417 31104686.488
 24  WAG+R2        15730038.483 227 31460530.967 31460531.122 31463120.600
 25  WAG+R3        15557931.647 229 31116321.295 31116321.453 31118933.744
 26  WAG+R4        15522409.200 231 31045280.401 31045280.562 31047915.666
 27  WAG+R5        15514373.997 233 31029213.994 31029214.158 31031872.075
 28  WAG+R6        15512860.896 235 31026191.791 31026191.958 31028872.689
 29  WAG+R7        15512409.307 237 31025292.615 31025292.784 31027996.329
 30  WAG+R8        15512352.508 239 31025183.016 31025183.188 31027909.545
 31  WAG+R9        15512345.053 241 31025172.107 31025172.282 31027921.453
 32  WAG+R10       Skipped 
 33  WAG           17003208.793 225 34006867.586 34006867.739 34009434.403
 34  WAG+F+G4      14365687.388 245 28731864.775 28731864.957 28734659.754
 35  WAG+F+R2      14563112.185 246 29126716.371 29126716.554 29129522.757
 36  WAG+F+R3      14381639.606 248 28763775.211 28763775.397 28766604.414
 37  WAG+F+R4      14340656.031 250 28681812.063 28681812.251 28684664.081
 38  WAG+F+R5      14329706.537 252 28659917.073 28659917.265 28662791.908
 39  WAG+F+R6      14327125.983 254 28654759.967 28654760.162 28657657.618
 40  WAG+F+R7      14326413.999 256 28653339.999 28653340.197 28656260.466
 41  WAG+F+R8      14326278.697 258 28653073.394 28653073.595 28656016.678
 42  WAG+F+R9      14326248.846 260 28653017.692 28653017.896 28655983.791
 43  WAG+F+R10     14326236.578 262 28652997.156 28652997.364 28655986.072
 44  WAG+F         15807158.616 244 31614805.232 31614805.412 31617588.802
Model LG4M is alias for MIX{LG4M1,LG4M2,LG4M3,LG4M4}*G4
 45  LG4M          15607438.159 226 31215328.318 31215328.472 31217906.542
Model LG4X is alias for MIX{LG4X1,LG4X2,LG4X3,LG4X4}*R4
 46  LG4X          15515705.617 231 31031873.235 31031873.396 31034508.500
Model LG+C10 is alias for LG+POISSON+G+FMIX{C10pi1:1:0.1191344178,C10pi2:1:0.0874372456,C10pi3:1:0.1037105070,C10pi4:1:0.0922584809,C10pi5:1:0.1070492801,C10pi6:1:0.1329945166,C10pi7:1:0.0538028458,C10pi8:1:0.0691986212,C10pi9:1:0.1319937434,C10pi10:1:0.1024203429}
 47  LG+C10        15137698.526 235 30275867.052 30275867.219 30278547.949
Akaike Information Criterion:           LG+F+R10
Corrected Akaike Information Criterion: LG+F+R10
Bayesian Information Criterion:         LG+F+R10
Best-fit model: LG+F+R10 chosen according to BIC

All model information printed to 57taxa.model
CPU time for ModelFinder: 4105596.109 seconds (1140h:26m:36s)
Wall-clock time for ModelFinder: 73436.186 seconds (20h:23m:56s)
Generating 1500 samples for ultrafast bootstrap (seed: 217780)...

NOTE: 84162 MB RAM (82 GB) is required!
Estimate model parameters (epsilon = 0.100)
1. Initial log-likelihood: -14361069.923
2. Current log-likelihood: -14273870.868
3. Current log-likelihood: -14272567.532
4. Current log-likelihood: -14272245.945
5. Current log-likelihood: -14272060.349
6. Current log-likelihood: -14271946.533
7. Current log-likelihood: -14271871.556
8. Current log-likelihood: -14271818.314
9. Current log-likelihood: -14271777.976
10. Current log-likelihood: -14271744.723
11. Current log-likelihood: -14271717.409
12. Current log-likelihood: -14271694.041
13. Current log-likelihood: -14271673.864
14. Current log-likelihood: -14271656.068
15. Current log-likelihood: -14271640.168
16. Current log-likelihood: -14271626.921
17. Current log-likelihood: -14271615.724
18. Current log-likelihood: -14271606.307
19. Current log-likelihood: -14271597.773
20. Current log-likelihood: -14271590.694
21. Current log-likelihood: -14271584.385
22. Current log-likelihood: -14271578.667
23. Current log-likelihood: -14271573.278
24. Current log-likelihood: -14271568.334
25. Current log-likelihood: -14271564.028
26. Current log-likelihood: -14271560.135
27. Current log-likelihood: -14271557.663
28. Current log-likelihood: -14271555.947
29. Current log-likelihood: -14271554.298
30. Current log-likelihood: -14271553.382
31. Current log-likelihood: -14271552.471
32. Current log-likelihood: -14271549.433
33. Current log-likelihood: -14271548.600
34. Current log-likelihood: -14271545.773
35. Current log-likelihood: -14271544.999
36. Current log-likelihood: -14271543.630
37. Current log-likelihood: -14271541.239
38. Current log-likelihood: -14271540.492
39. Current log-likelihood: -14271539.787
40. Current log-likelihood: -14271539.103
41. Current log-likelihood: -14271538.087
42. Current log-likelihood: -14271537.390
43. Current log-likelihood: -14271536.725
44. Current log-likelihood: -14271536.073
45. Current log-likelihood: -14271535.440
46. Current log-likelihood: -14271534.501
47. Current log-likelihood: -14271533.829
48. Current log-likelihood: -14271533.207
49. Current log-likelihood: -14271532.605
50. Current log-likelihood: -14271532.010
51. Current log-likelihood: -14271531.119
52. Current log-likelihood: -14271530.520
53. Current log-likelihood: -14271529.914
54. Current log-likelihood: -14271529.343
55. Current log-likelihood: -14271528.488
56. Current log-likelihood: -14271528.046
57. Current log-likelihood: -14271527.468
58. Current log-likelihood: -14271527.051
59. Current log-likelihood: -14271526.494
60. Current log-likelihood: -14271526.141
61. Current log-likelihood: -14271525.408
62. Current log-likelihood: -14271524.992
63. Current log-likelihood: -14271524.570
64. Current log-likelihood: -14271524.035
65. Current log-likelihood: -14271523.691
66. Current log-likelihood: -14271523.025
67. Current log-likelihood: -14271522.592
68. Current log-likelihood: -14271522.230
69. Current log-likelihood: -14271521.857
70. Current log-likelihood: -14271521.516
71. Current log-likelihood: -14271521.157
72. Current log-likelihood: -14271520.831
73. Current log-likelihood: -14271520.523
74. Current log-likelihood: -14271520.345
75. Current log-likelihood: -14271520.040
76. Current log-likelihood: -14271519.866
77. Current log-likelihood: -14271519.566
78. Current log-likelihood: -14271519.036
79. Current log-likelihood: -14271518.670
80. Current log-likelihood: -14271518.350
81. Current log-likelihood: -14271518.172
82. Current log-likelihood: -14271517.872
83. Current log-likelihood: -14271517.703
84. Current log-likelihood: -14271517.409
85. Current log-likelihood: -14271517.242
86. Current log-likelihood: -14271517.072
87. Current log-likelihood: -14271516.782
88. Current log-likelihood: -14271516.305
89. Current log-likelihood: -14271515.924
90. Current log-likelihood: -14271515.628
91. Current log-likelihood: -14271515.461
92. Current log-likelihood: -14271515.286
93. Current log-likelihood: -14271515.001
94. Current log-likelihood: -14271514.842
95. Current log-likelihood: -14271514.680
96. Current log-likelihood: -14271514.401
97. Current log-likelihood: -14271514.246
98. Current log-likelihood: -14271513.779
99. Current log-likelihood: -14271513.463
Optimal log-likelihood: -14271513.463
Site proportion and rates:  (0.231,0.009) (0.126,0.098) (0.086,0.253) (0.077,0.436) (0.072,0.669) (0.077,0.920) (0.098,1.316) (0.119,1.991) (0.092,3.322) (0.021,6.429)
Parameters optimization took 99 rounds (6219.924 sec)
Computing ML distances based on estimated model parameters... 102.692 sec
Computing BIONJ tree...
0.006 seconds
Log-likelihood of BIONJ tree: -14277133.183
--------------------------------------------------------------------
|             INITIALIZING CANDIDATE TREE SET                      |
--------------------------------------------------------------------
Generating 8 parsimony trees... 325.442 second
Computing log-likelihood of 8 initial trees ... 133.659 seconds
Current best score: -14271513.463

Do NNI search on 10 best initial trees
Estimate model parameters (epsilon = 0.100)
BETTER TREE FOUND at iteration 1: -14270595.234
Iteration 10 / LogL: -14270633.699 / Time: 23h:16m:35s
Finish initializing candidate tree set (8)
Current best tree score: -14270595.234 / CPU time: 3869.112
Number of iterations: 10
--------------------------------------------------------------------
|               OPTIMIZING CANDIDATE TREE SET                      |
--------------------------------------------------------------------
Iteration 20 / LogL: -14270776.097 / Time: 23h:52m:12s
Iteration 30 / LogL: -14270720.844 / Time: 24h:27m:56s (9h:57m:22s left)
Iteration 40 / LogL: -14270655.600 / Time: 25h:4m:30s (7h:18m:49s left)
Iteration 50 / LogL: -14270621.700 / Time: 25h:40m:27s (5h:29m:26s left)
Log-likelihood cutoff on original alignment: -14270878.253
Iteration 60 / LogL: -14270699.275 / Time: 26h:16m:30s (4h:5m:0s left)
Iteration 70 / LogL: -14270763.504 / Time: 26h:51m:10s (2h:53m:58s left)
Iteration 80 / LogL: -14270673.478 / Time: 27h:29m:16s (1h:53m:3s left)
Iteration 90 / LogL: -14270755.763 / Time: 28h:2m:1s (0h:56m:37s left)
Iteration 100 / LogL: -14270718.105 / Time: 28h:36m:15s (0h:4m:58s left)
Log-likelihood cutoff on original alignment: -14270878.253
NOTE: Bootstrap correlation coefficient of split occurrence frequencies: 1.000
Total number of trees received: 0
Total number of trees sent: 0
Total number of NNI searches done by myself: 102
TREE SEARCH COMPLETED AFTER 102 ITERATIONS / Time: 28h:42m:21s

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|                    FINALIZING TREE SEARCH                        |
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Performs final model parameters optimization
Estimate model parameters (epsilon = 0.010)
1. Initial log-likelihood: -14270595.234
2. Current log-likelihood: -14270595.056
3. Current log-likelihood: -14270594.858
4. Current log-likelihood: -14270594.680
5. Current log-likelihood: -14270594.507
6. Current log-likelihood: -14270594.338
7. Current log-likelihood: -14270594.171
8. Current log-likelihood: -14270594.002
9. Current log-likelihood: -14270593.838
10. Current log-likelihood: -14270593.330
11. Current log-likelihood: -14270593.136
12. Current log-likelihood: -14270592.963
13. Current log-likelihood: -14270592.799
14. Current log-likelihood: -14270592.638
15. Current log-likelihood: -14270592.480
16. Current log-likelihood: -14270592.319
17. Current log-likelihood: -14270592.164
18. Current log-likelihood: -14270592.012
19. Current log-likelihood: -14270591.791
20. Current log-likelihood: -14270591.614
21. Current log-likelihood: -14270591.461
22. Current log-likelihood: -14270591.315
23. Current log-likelihood: -14270591.172
24. Current log-likelihood: -14270591.026
25. Current log-likelihood: -14270590.886
26. Current log-likelihood: -14270590.748
27. Current log-likelihood: -14270590.250
28. Current log-likelihood: -14270590.089
29. Current log-likelihood: -14270589.944
30. Current log-likelihood: -14270589.804
31. Current log-likelihood: -14270589.662
32. Current log-likelihood: -14270589.526
33. Current log-likelihood: -14270589.393
34. Current log-likelihood: -14270589.262
35. Current log-likelihood: -14270588.790
36. Current log-likelihood: -14270588.636
37. Current log-likelihood: -14270588.497
38. Current log-likelihood: -14270588.364
39. Current log-likelihood: -14270588.228
40. Current log-likelihood: -14270588.099
41. Current log-likelihood: -14270587.972
42. Current log-likelihood: -14270587.848
43. Current log-likelihood: -14270587.659
44. Current log-likelihood: -14270587.513
45. Current log-likelihood: -14270587.387
46. Current log-likelihood: -14270587.268
47. Current log-likelihood: -14270587.151
48. Current log-likelihood: -14270587.030
49. Current log-likelihood: -14270586.916
50. Current log-likelihood: -14270586.803
51. Current log-likelihood: -14270586.658
52. Current log-likelihood: -14270586.544
53. Current log-likelihood: -14270586.137
54. Current log-likelihood: -14270586.016
55. Current log-likelihood: -14270585.901
56. Current log-likelihood: -14270585.783
57. Current log-likelihood: -14270585.671
58. Current log-likelihood: -14270585.562
59. Current log-likelihood: -14270585.421
60. Current log-likelihood: -14270585.310
61. Current log-likelihood: -14270585.198
62. Current log-likelihood: -14270585.093
63. Current log-likelihood: -14270584.990
64. Current log-likelihood: -14270584.888
65. Current log-likelihood: -14270584.783
66. Current log-likelihood: -14270584.683
67. Current log-likelihood: -14270584.585
68. Current log-likelihood: -14270584.165
69. Current log-likelihood: -14270584.051
70. Current log-likelihood: -14270583.946
71. Current log-likelihood: -14270583.845
72. Current log-likelihood: -14270583.746
73. Current log-likelihood: -14270583.649
74. Current log-likelihood: -14270583.548
75. Current log-likelihood: -14270583.453
76. Current log-likelihood: -14270583.325
77. Current log-likelihood: -14270583.228
78. Current log-likelihood: -14270583.130
79. Current log-likelihood: -14270583.037
80. Current log-likelihood: -14270582.947
81. Current log-likelihood: -14270582.859
82. Current log-likelihood: -14270582.772
83. Current log-likelihood: -14270582.402
84. Current log-likelihood: -14270582.270
85. Current log-likelihood: -14270582.174
86. Current log-likelihood: -14270582.083
87. Current log-likelihood: -14270581.988
88. Current log-likelihood: -14270581.899
89. Current log-likelihood: -14270581.812
90. Current log-likelihood: -14270581.728
91. Current log-likelihood: -14270581.644
92. Current log-likelihood: -14270581.557
93. Current log-likelihood: -14270581.475
94. Current log-likelihood: -14270581.358
95. Current log-likelihood: -14270581.274
96. Current log-likelihood: -14270581.194
97. Current log-likelihood: -14270581.109
98. Current log-likelihood: -14270580.760
99. Current log-likelihood: -14270580.687
Optimal log-likelihood: -14270580.687
Site proportion and rates:  (0.235,0.010) (0.130,0.104) (0.090,0.273) (0.079,0.471) (0.078,0.722) (0.074,0.994) (0.106,1.422) (0.114,2.182) (0.079,3.589) (0.016,6.947)
Parameters optimization took 99 rounds (3003.325 sec)
BEST SCORE FOUND : -14270580.687
Creating bootstrap support values...
Split supports printed to NEXUS file 57taxa.splits.nex
Total tree length: 22.149

Total number of iterations: 102
CPU time used for tree search: 1432801.049 sec (398h:0m:1s)
Wall-clock time used for tree search: 23414.760 sec (6h:30m:14s)
Total CPU time used: 6082009.431 sec (1689h:26m:49s)
Total wall-clock time used: 106346.335 sec (29h:32m:26s)

Computing bootstrap consensus tree...
Reading input file 57taxa.splits.nex...
114 taxa and 255 splits.
Consensus tree written to 57taxa.contree
Reading input trees file 57taxa.contree
Log-likelihood of consensus tree: -14270577.410

Analysis results written to: 
  IQ-TREE report:                57taxa.iqtree
  Maximum-likelihood tree:       57taxa.treefile
  Likelihood distances:          57taxa.mldist

Ultrafast bootstrap approximation results written to:
  Split support values:          57taxa.splits.nex
  Consensus tree:                57taxa.contree
  Screen log file:               57taxa.log

Date and Time: Sat Dec  4 07:09:40 2021
